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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4711123 chr6:26760128 G/A ZNF322B chr9:99957633-99961910:- -0.54 -8.98 6.01E-18 Box Plot
THCA rs4711164 chr6:28115156 C/T BTN3A2 chr6:26365387-26378548:+ -0.3 -6.29 7.26E-10 Box Plot
THCA rs4711165 chr6:28115184 T/G BTN3A2 chr6:26365387-26378548:+ -0.3 -6.29 7.26E-10 Box Plot
THCA rs4712144 chr6:57192417 C/T GUSBL2 chr6:58246159-58287724:- -0.33 -6.33 5.53E-10 Box Plot
THCA rs4712149 chr6:57229990 G/A GUSBL2 chr6:58246159-58287724:- -0.35 -6.46 2.51E-10 Box Plot
THCA rs4712154 chr6:57256870 A/G GUSBL2 chr6:58246159-58287724:- -0.34 -6.74 4.66E-11 Box Plot
THCA rs4713006 chr6:26519872 A/G ZNF322B chr9:99957633-99961910:- 0.54 10.3 1.35E-22 Box Plot
THCA rs4713008 chr6:26538268 T/C ZNF322B chr9:99957633-99961910:- 0.54 10.31 1.21E-22 Box Plot
THCA rs4713011 chr6:26663350 A/G ZNF322B chr9:99957633-99961910:- 0.61 7.39 6.71E-13 Box Plot
THCA rs4713018 chr6:26706711 G/A ZNF322B chr9:99957633-99961910:- -0.57 -9.65 2.87E-20 Box Plot
THCA rs4713036 chr6:26756924 T/C ZNF322B chr9:99957633-99961910:- -0.61 -7.02 7.57E-12 Box Plot
THCA rs4713037 chr6:26758030 G/T ZNF322B chr9:99957633-99961910:- 0.66 10.55 1.55E-23 Box Plot
THCA rs4713069 chr6:27128307 T/G ZNF322B chr9:99957633-99961910:- -0.39 -6.59 1.19E-10 Box Plot
THCA rs4713072 chr6:27192091 T/C ZNF322B chr9:99957633-99961910:- -0.4 -6.4 3.68E-10 Box Plot
THCA rs4713073 chr6:27192551 T/G ZNF322B chr9:99957633-99961910:- -0.4 -6.4 3.68E-10 Box Plot